Bioconductor caAffy Q-Spline Normalization

A method to normalize Affymetrix arrays to each other or to a set of target intensities, as defined in documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html (NCI Thesaurus)

YOU MAY ALSO LIKE

Bioconductor caAffy Player Out Probe Summary Method

Summarizes probe sets using the 'player out' statistical algorithm. Defined in the documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html.

Bioconductor caAffy Median Polish Probe Summary Method

Summarizes probe sets using Tukey's median polish procedure. Defined in the documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html.

Bioconductor caAffy MAS Probe Summary Method

Summarizes probe sets using the robust average 1-step Tukey biweight algorithm. Defined in the documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html

Bioconductor caAffy Loess Normalization

A method to normalize Affymetrix arrays using loess, as defined in documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html

Bioconductor caAffy Li Wong Probe Summary Method

Summarizes probe sets using the model described in Li and Wong (2001) to a probe set with I chips and J…

Bioconductor caAffy Invariant Set Normalization

A method to normalize arrays in an AffyBatch using an invariant set, as defined in documents available at http://bioconductor.org/packages/1.9/bioc/html/affy.html